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Exploring Phytoplankton Pigment Concentrations
Overview
Approximately 70% of the Earth is covered by oceans varying in color
from deep blue to green. This variation is due to varying populations of
tiny aquatic plants called phytoplankton,
or algae. Where phytoplankton production is small, such as the Sargasso
Sea, the water is deep blue. By contrast, coastal waters rich in phytoplankton
are green.
Phytoplankton are the base of the food chain in the sea. In this activity
you will use data collected by the Coastal Zone Color Scanner (CZCS)
on the Nimbus-7 satellite during the period 1978-1986. The CZCS data shows
the average phytoplankton pigment concentration (in mg/m^3) for the oceans
of the world each month during that period. Additional background information
is available here.
Learner Outcomes
By completing this lesson, the learner will:
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use remote sensing data and scientific visualization techniques using NIH
Image (download pc
or mac version
as needed).
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display and interpret images of phytoplankton pigment (chlorophyll) concentrations
in the global oceans.
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use NASA scientific data sets and classification schemes
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convert image data to pigment concentration and biomass data.
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compute sea surface pigmentation concentration from satellite image data
using a scientific calculator and an exponential equation.
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use pigmentation data and proportional reasoning to estimate the biomass
of the food chain at the phytoplankton, zooplankton I, zooplankton II,
and fish levels.
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investigate periodic changes in the distribution of phytoplankton pigmentation.
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reflect on the environmental significance of man's activities in and on
the sea as they relate to phytoplankton productivity.

Exploration
Let's make an analysis of the false color image of the world's oceans
shown below. A number of clues concerning the contents of this image are
encoded in its name, which in general is of the form CyydddI.BRW. This
image comes from the SeaWiFs
Mission.
C 82 120 I . BRW
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C indicates that the file contains pigment concentration data
yy indicates the year, in this case 1982
ddd indicates the day of the year (1 - 365) over which the previous month's
data was averaged, in this case the 120th day of the year.
I indicates that the data set has been interpolated to fill in missing
data points
BRW indicates that this is a browse (small) file. All
browse files in this data set are 360 pixels wide and 180 pixels high.
Each pixel in this array represents an equal-angle (1° longitude by
1° latitude) section of the planet. These sections are not equal area,
however. |
1. Which month is indicated in the file name C82120I.BRW?
2. How would you write the file name for an image containing
interpolated pigment concentration data for the month ending on ...
- day 59 of 1982 Which month is this data for?
- day 273 of 1982 Which month is this data for?
- day 151 of 1982 Which month is this data for?
3. Make a sketch and explain why equal-angle sections on the Earth
are not equal in area.
4. If you have time, check out some more
images at this NASA SeaWiFs Site.
Concept Introduction
QUESTION: What is the biomass of the food chain at the phytoplankton,
zooplankton I, zooplankton II, and fish levels. How does this change throughout
the year?
1. Save the image above as C82120I.BRW, convert to TIF format,
and print out these instructions, and start NIH Image.
The
data in C82120I.BRW represents the average phytoplankton pigment concentration
during the month of April 1982. NIH Image displays that data in a visual
format in which the phytoplankton pigment concentrations are color-coded.
The value of each pixel (move the mouse around the image), also
called the data number or DN, is found in the Info window in the lower
left hand corner of the display. These DN range from 0 to 255, the same
as the range in colors or gray-scales on your computer. Storing the data
in this manner makes the program run faster. Of course, it means that you
can't read the pigment concentrations directly from the image. To convert
the DN to pigment concentrations, you will have to use the following formula:
| Average chlorophyll per pixel in mg/m^3 = 10^(.012*DN - 1.4) |
Let's explore what this formula means and how it is used. In the corner
of your classroom, use 3 meter sticks to mark the edges of an imaginary
box 1 meter (m) on a side. The volume of that box is 1 m3. In the corner
of that box (where the 3 meter sticks come together) place a smaller cube
10 cm on a side.
2. What is the volume of the smaller cube in cm3?
3. The capacity of the smaller cube is defined to be 1 liter.
What is the capacity of the larger cube in liters?
4. The mass of 1 liter of water is defined to be 1 kilogram
(kg). What is the mass of a cubic meter of water?
5. The weight of a 1 kg mass is approximately 2.2 pounds. What
is the weight of a cubic meter of water? Is that more or less than a ton?
A milligram (mg) is defined to be one-thousandth of a gram. For comparison,
a postage stamp has a mass of approximately 20 mg.
EXAMPLE CALCULATION: In order to compute the pigment concentration
for a particular DN, you substitute the DN in the formula and compute the
result. For this, a calculator is necessary. For the sake of this example,
compute the pigment concentration associated with a DN of 100.
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First compute the value of the exponent in the expression .012 *DN - 1.4.
.012*(100) - 1.4 = -0.2
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Second, raise the number 10 to the -0.2 power.
10^ (-0.2) = 0.63
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Third, interpret your result.
There are about 0.63 milligrams of chlorophyll per cubic meter of sea
water for DN = 100 ... less than 1/20th the mass of a postage stamp.
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6. The range in DN values is 0 - 255. Compute the corresponding
range in pigment concentrations in mg/m3. Go through the image and find
various DNs and convert them to pigment concentrations. What is the highest
concentration you can find? The lowest?
7. How many milligrams per cubic meter are there in a high concentration
area? How many postage stamps does this equal?
8. Zoom in on each of the following locations and find the pigment
concentration of the sea pixel closest to each city. The zoom tool is the
magnifying glass found at the upper left hand corner of the Tools window.
Click on it and then click on the image near each city. Click several times
to keep enlarging the image until you can easily pick out a sea pixel close
to the city. The land masses are represented by the DN=255, the ice is
represented by the DN=254 and the coastlines are represented by the DN=253.
When you choose a pixel close to each city, avoid these DNs.
(X,Y) City DN Pigment Concentration (104,90) Singapore
(302,54) Buenos Aires
(116,57) Perth
(11,149) Oslo
9. Which coastal area has the highest pigment concentration? The
lowest?
Over the course of a year, plants on land cycle through stages of germination,
growth, reproduction, and death or dormancy determined in large part by
seasonal changes in climate and sunlight. What about phytoplankton?
Is it's life cycle also timed by the changing seasons or are there other,
more important factors that determine its productivity? One way to find
out would be to look at a sequence of pigment concentration images, each
representing a different month of the year. The box below contains 12 months
of pigment concentration images for 1982 in TIFF format. Images may be
saved and examined individually or grouped and then animated, averaged,
or printed side by side in a montage using image processing software. Save
each of these images to your hard-drive.
|
IMAGE LIBRARY
( Jan. , Feb.
, Mar. , Apr. , May.
, Jun. , Jul. , Aug.
, Sep. , Oct. , Nov.
, Dec.)
|
From the File pull-down menu, Open all of the pigment concentration
files for 1982. As each file is opened, it stacks on top of any previously
opened files. When all 12 images for 1982 have been opened, select Windows
to Stack from the Stack pull-down menu. Then select Animate from
the Stack pull-down menu. All 12 images will be displayed in the order
that you opened them ... probably too fast for comfort ... over and over.
To
control the speed of the animation, type a number from 1 to 9, 1 producing
the slowest animation. To step forward or backward through the stack, use
the right arrow or back arrow keys. Click on the image with the mouse to
end the animation.
10. In which month of 1982 were the phytoplankton in the northern
hemisphere most productive (indicated by lots of red)? In the southern
hemisphere?
11. Where did that production occur, in equatorial or polar waters?
12. What DN is associated with the color red? Compute the pigment
concentration for that DN.
In the sea, the base of the food chain is phytoplankton. Little animals
called zooplankton eat the phytoplankton. Fish and other animals eat the
zooplankton. Mammals like dolphins, seals, and killer whales eat the fish.
All of these animals derive their nourishment either directly or indirectly
from the phytoplankton. If the phytoplankton decline in number, so must
all the creatures that depend on them. Conversely, where the phytoplankton
bloom, zooplankton, fish, and sea mammals may eat their fill from the bounty
of the sea. In other words, the productivity of the phytoplankton sets
a kind of upper limit on the productivity of the entire food chain. By
taking note of a few facts, we can estimate the mass of the plants and
animals at each level of the food chain.
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About 2.5 % of the organic material in phytoplankton is chlorophyll. The
rest of the organic material is related to other cellular structures and
functions.
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About 10% of the overall mass of phytoplankton is organic material. The
rest is water. The overall mass of the phytoplankton is the mass of the
base of the food chain.
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The second level in the food chain, zooplankton 1 animals, has an overall
mass of approximately 10% of the phytoplankton population.
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The third level in the food chain, zooplankton 2 animals, has an overall
mass of approximately 10% of the zooplankton I population.
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The fourth level of the food chain, fish, has an overall mass of approximately
10% of the zooplankton 2 population.
Using these facts, you can estimate the overall biomass of the food chain
as follows:
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For any given DN, the chlorophyll concentration is given by the expression
mg/m^3 = 10^(0.12*DN - 1.4 )
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The total organic material per cubic meter (dry biomass) may be computed
by dividing the chlorophyll concentration by .025.
-
The overall mass (biomass) of the phytoplankton is obtained by dividing
the dry biomass by .10. For example, for a DN of 20, the pigment concentration
is 10^(.012*20 - 1.4 ) = .069 mg/m^3 of chlorophyll. Dividing this amount
by .025 yields 1.38 mg/m3 of dry biomass. Dividing this dry biomass by
.10 yields 13.8 mg/m^3 of phytoplankton biomass. For a DN = 20, the base
of the food chain is less than one postage stamp of food per cubic meter!
13. Compute the phytoplankton biomass associated with a DN of 200.
14. How many postage stamps of phytoplankton per cubic meter
is this at the base of the food chain? · The biomass of the zooplankton
and the fish can be estimated based on the biomass of the phytoplankton.
The biomass of the zooplankton 1 is about 10% of the biomass of the phytoplankton.
Similarly, the biomass of the zooplankton 2 is 10% of the biomass of the
zooplankton 1. The biomass of the fish is 10% of the biomass of the zooplankton
2.
15. Calculate the biomass of the zooplankton and the fish using
a DN of 200. · Now, find an area on the image that appears to have
a high pigment concentration.
16. Calculate the biomass of the fish in this area.
17. Do the same for an area that appears to have a low pigment
concentration. How many mg/m^3 of fish are in this area?
18. Write a few sentences comparing and contrasting the fish
biomass in both areas.
Application
By now you should have a better understanding of the importance of this
tiny thing called phytoplankton. It is the bottom of the food chain, thus
supporting life in the oceans. It is also a powerful force in the global
climate. Small can be mighty!
With all 12 images in a stack, it is a simple matter to compute the
average phytoplankton productivity for the entire year. From the Stack
pull-down window, select Average.
19. Over the course of the entire year, was the production of
phytoplankton greatest near the coasts of the continents or in mid-ocean?
20. Is phytoplankton production constant during the year or does
it fluctuate?
21. If you were a whale hungry for a giant serving of a tasty
little zooplankton called krill, where would you go to eat and when would
you want to be there?
22. Many industrial processes produce toxic chemicals as a by-product.
If those chemicals are dumped into rivers, they eventually reach the sea.
Discuss the possible consequences to phytoplankton production and the oceanic
food chain in general.
23. Suppose that dumping of some materials in the ocean is necessary.
Where would you recommend dumping? Where would you avoid? Why?
Extension Activities
Create histograms of global phytoplankton pigment over a period of months.
Compare the histograms and report your findings to your teacher.
Select a portion of one ocean and do a detailed study over time of the
phytoplankton pigmentation there.
Using both the sea surface temperature data and the phytoplankton pigmentation
data, look for a relationship between temperature
and phytoplankton pigmentation. Report your findings to your teacher.
If you have Internet access, check out http://seawifs.gsfc.nasa.gov/scripts/SEAWIFS.html
Where do whales go to eat? why
Sea WiFs images are for phytoplankton whereas Topex images are also colored,
what is TOPEX looking at?
SeaWiFs Image
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Topex/Posiden Image
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