My CV: pdf
Papers
- T. Gedeon, A. Parker, C. Campion, and Z. Aldworth. "Annealing and
the normalized N-cut."
Pattern Recognition, 41(2):592-606. February 2008:
pdf.
- C. Vogel, D. Arathorn, A. Roorda, and A. Parker. "Retinal motion
estimation and image
dewarping in adaptive optics scanning
laser ophthalmoscopy." Optics
Express, vol 14,
pp. 487-497.
January, 2006:
pdf
- C. Vogel, D. Arathorn, A. Parker, and A. Roorda. "Retinal
Motion Tracking in Adaptive Optics Scanning Laser Ophthalmoscopy."
Technical Digest of the
Optical Society of America Conference
2005: Signal Recovering in Adaptive Optics. Charlotte, NC, June,
2005: pdf
- Albert Parker and Tomas Gedeon. "Bifurcations of a
class of
$S_n$-invariant constrained optimization problems", Journal
of Dynamics and Differential Equations, 16(3):629--678, July 2004:
pdf
- Albert Parker. "A Bayesian Approach to Hierarchical Model Building."
Masters project in statistics, MSU-Bozeman. May 3, 2004: pdf
- Albert E. Parker, Tomas Gedeon, and Alexander Dimitrov.
"Annealing and the rate distortion problem." In S. Thrun,
S. Becker and K. Obermayer,
editors,
Advances
in Neural Information Processing
Systems 15, pages
969-976. MIT Press, 2003: pdf
- A. Dimitrov, T. Gedeon, B. Mumey, R. Snider, A. E. Parker, and J.
P. Miller. Derivation of natural
stimulus feature set using a data-driven model. In P. M. A. Sloot, D.
Abramson, A. V. Bogdanov,
J. Dongarra, A. Y. Zomaya, and Y. E. Gorbachev, editors,
International
Conference on Computational
Science, volume 2660 of Lecture Notes in Computer
Science,
pages 337.345.
Springer, August 2003:
pdf
- Albert E. Parker. "Symmetry Breaking Bifurcations of the
Information Distortion." Ph.D. Thesis. Montana State
University-Bozeman. May 2003.
(double spaced for one sided printing):
pdf (1.6MB);
(singlespaced for two sided
printing): pdf (1.6MB).
- Tomas Gedeon, Albert E. Parker and Alexander G. Dimitrov.
"Information Distortion and Neural Coding". Canadian
Applied
Mathematics Quarterly, volume 10, number 1, pp 33-70. Spring,
2003:
pdf or ps
- A. G. Dimitrov, J.P. Miller, Z. Aldsworth, T. Gedeon and
A. E. Parker. "Analysis of neural coding through quantization with an
information-based distortion measure."
Network: Computation in Neural Systems, vol 14,
pp 151-176, February 2003: pdf
- A. G. Dimitrov, J.P. Miller, Z. Aldsworth, and A. Parker. "Spike
pattern-based coding schemes in the cricket cercal sensory system."
Neurocomputing,
44-46, 373–379, 2002: ps
- S. Kubiak, H. Lehr, R. Levy, T. Moeller, A. Parker, and E. Swim.
"Modeling Control of HIV Infection through Structured Treatment
Interruptions with Recommendations for Experimental Protocol."
Report 5 in Pierre A. Gremaud, Zhilin Li, Ralph C. Smith, and Hien T.
Tran,
editors, Center for
Research in Scientific Computing at North
Carolina State University Technical Report, CRSC-TR01-27.
November
2001: pdf or ps
Presentations
- "CG optimizers, Lanczos Eigensolvers, and sampling"
Electronics
Lab Meeting. University
of Otago, Dunedin. March 13, 2008.
- "Exact versus Lanczos Eigensolvers"
Electronics
Lab Meeting. University
of Otago, Dunedin. February 28, 2008.
- "Gaussian Process" Electronics
Lab Meeting. University
of Otago, Dunedin. October 5, 2007.
- "Eye Motion Estimation and
Image Dewarping using a
Map Seeking Circuit"
Center for Adaptive Optics Spring Retreat, Image Processing
Workshop. UC Santa Cruz. March 30, 2006: pdf
- "Symmetry Breaking when deciphering the neural code" University
of
Montana, Missoula. September 12, 2005: ppt
- "Retinal
Motion Tracking in Adaptive Optics Scanning Laser Ophthalmoscopy"
Optical Society of America Conference 2005: Signal Recovering in Adaptive
Optics. Charlotte, NC, June,
2005: pdf
- "Dewarping Images from a Scanning Laser Ophthalmoscope"
Center for Adaptive Optics, SLO image processing meeting. UC
Berkeley, April 19, 2005: ppt
- "Tracking Eye Motion from Retinal Scan Data with a Map Seeking
Circuit" Center for Adaptive Optics Fall Retreat, Controlling Eye
Movements Session. UCLA Conference Center, Lake Arrowhead, CA.
November 13, 2004: pdf
- "Your Brain, Crickets, and Math" Longfellow Elementary School.
Bozeman, MT. May, 2004.
- "Phase Transitions in the Information Distortion" Neural Information
Processing Systems 2003 workshop on
Information Theory and Learning:
The Bottleneck and Distortion Approach. Whistler, BC, Canada. December 13,
2003: ppt.
- "Modelling and Control Issues Arising in the Quest for a
Neural Decoder"
Computation, Control, and
Biological Systems Conference VIII.
MSU-Bozeman. July 30, 2003: ppt
- "A Bifurcation Theoretical Approach to Solving the Neural Coding
Problem" IGERT Symposium. Carnegie Mellon University, Pittsburgh,
PA. June 28, 2003: ppt
- "Symmetry Breaking Bifurcations of the Information Distortion"
Dissertation Defense, Bozeman, MT. April 8, 2003: ppt
- "Annealing and the Rate Distortion Problem" NIPS, Poster
Session. Vancouver, Canada. December 11, 2002: ppt
- "Symmetry Breaking Bifurcation of the Distortion Problem"
American Mathematical Society Sectional Meeting. University of
Wisonsin, Madison, WI.
October 13, 2002: ppt
- "Coninuation and Bifurcation of the Distortion Problem"
American Mathematical Society Sectional Meeting, Poster Session.
University of Wisonsin, Madison, WI.
October 13, 2002: ppt
- "Continuation and Symmetry Breaking Bifurcation of the Information
Distortion Function" Applied Mathematics Seminar, MSU-Bozeman.
September 19, 2002: ppt
- "Gottfried Leibniz, Carl Gauss and Neural Coding" Bozeman High School.
Bozeman, MT. May 9, 2002:ppt
- "Information Distortion and Neural Coding" First SIAM
Conference on the Life Sciences, Poster Session. Boston, MA. March
7, 2002: ppt
- "Recognition" Journal Club, Center for Computational Biology, MSU-Bozeman.
February 26, 2002: ppt
- "Functional Magnetic Resonance". Journal Club, Center for
Computational Biology, MSU-Bozeman. February 20, 2002:ppt
- "Neural Coding Through the Ages". Complex Biological Systems
Seminar, MSU-Bozeman. February 1, 2002: ppt
- "Approaches to Discovering Neural Coding Schemes" Applied
Mathematics Seminar, MSU-Bozeman. January 31, 2002: ppt
- "PhD Oral Examination: Information Theory and Neural Coding"
Applied Mathematics Seminar, MSU-Bozeman. November 29, 2001:
ppt
- "A Probability Model for
Neural Coding" Meeting of the Montana
Chapter of the American Statistical
Association. Montana Tech, Butte, MT. October 23, 2001. ppt
- "Devising an Experimental Protocol for Controlling HIV Infection
through Structured Treatment Interruptions"
Applied Mathematics
Seminar, MSU-Bozeman. October 11,2001: pdf
and ps
- "My Research: Neural Coding and Decoding" Complex Biological
Systems Retreat. Bridger Ski Resort. September, 2001: ppt
- "Modeling Control of HIV Infection through Structured
Treatment Interruptions"
Industrial Mathematical Modeling Workshop. North
Carolina State University, Raleigh, NC. August, 2001: three seperate
files, all in ps: slides, more
slides and more slides.
- "Computational Issues when Modelling Neural Coding Schemes"
Meeting of Montana NSF EPSCoR
Project Participants. Northern Rockies Center for Applied
Computational Science. MSU-Bozeman. July 9, 2001: ppt
- "Probability Theory and Neural Coding" Final
Project for Probability Theory: MATH586. MSU-Bozeman. May 4, 2001: pdf or ps
- "Functionalism" Journal Club, Center for Computational Biology,
MSU-Bozeman. May 3, 2001: ppt
- "The Fundamentals of Neural Coding and Decoding" Montana Academy
of the Sciences.
MSU-Bozeman. April, 2001: ppt
- "Large Scale Optimization Techniques for Alex's Neural Coding and
Decoding Model" Center for Computational Biology. MSU-Bozeman.
February 27, 2001: pdf or ps
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